BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F09LP1|AL425003
(984 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1736 1682 0.0
>3x_Contig1736
Length = 21222
Score = 1682 bits (846), Expect = 0.0
Identities = 863/868 (99%), Gaps = 1/868 (0%)
Strand = Plus / Minus
Query: 1 gatctgggtaatttttgcgatgaaaatcccgatcagtccactattccctgaccatccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 gatctgggtaatttttgcgatgaaaatcccgatcagtccactattccctgaccatccttt 809
Query: 61 atccttacctgtttcgctattgtttgtatatgtgcttttagtttttcttttgacatatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atccttacctgtttcgctattgtttgtatatgtgcttttagtttttcttttgacatatct 749
Query: 121 aacatcaacaaaaacatctaagaaaacctttagaacaggatgatactccaagtagaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aacatcaacaaaaacatctaagaaaacctttagaacaggatgatactccaagtagaaaaa 689
Query: 181 tattcgggtacgttttgaatgttacaaaagcagaatacttgattgttcgatcatagccac 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 688 tattcgggtacgttttgaatgtcacaaaagcagaatacttgattgttcgatcatagccac 629
Query: 241 tagttgaccaactgtwacataactggaccttatacggtcgatagcaggttattaatccat 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 tagttgaccaactgtaacataactggaccttatacggtcgatagcaggttattaatccat 569
Query: 301 tcatcttttgcggaaatatagttctacattgacaaggccaaaacaaaagtatagttatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tcatcttttgcggaaatatagttctacattgacaaggccaaaacaaaagtatagttatgg 509
Query: 361 gttctgatgatacgggaggtctattcaaatggacaattgatgcgctattcaacagagaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gttctgatgatacgggaggtctattcaaatggacaattgatgcgctattcaacagagaca 449
Query: 421 catctccatctacaatgtatgataaacaactgcagcyagactcattcgatgaggaaatat 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 448 catctccatctacaatgtatgataaacaactgcagcaagactcattcgatgaggaaatat 389
Query: 481 actcaagacctagagcctcatctttctcggatccagatatttactcaaaatatgaattat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 actcaagacctagagcctcatctttctcggatccagatatttactcaaaatatgaattat 329
Query: 541 tacgagatgaggacgaacctgacttattgagacctgttagcatgaacgggttaccttacg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tacgagatgaggacgaacctgacttattgagacctgttagcatgaacgggttaccttacg 269
Query: 601 agaagcaggatacaaacactttccacgcaagaagagcaagagagaggcgagttcaagaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agaagcaggatacaaacactttccacgcaagaagagcaagagagaggcgagttcaagaaa 209
Query: 661 cgccaaatattagacgagcaccgaatcccaacgatcccataatctcaaaattatttcaag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 cgccaaatattagacgagcaccgaatcccaacgatcccataatctcaaaattatttcaag 149
Query: 721 tcgatgaagatgattcacagttaaacactaatgagatgaggtcgcaacgagaaaaattca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tcgatgaagatgattcacagttaaacactaatgagatgaggtcgcaacgagaaaaattca 89
Query: 781 acactggacggttaccgggcaagtttccatctccaac-taagcagtataatgctcgtata 839
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 88 acactggacggttaccgggcaagtttccatctccaacttaagcagtataatgctcgtata 29
Query: 840 ttcaacagggatgcatttactggagctg 867
| ||||||||||||||||||||||||||
Sbjct: 28 tccaacagggatgcatttactggagctg 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7212
Number of Sequences: 1807
Number of extensions: 7212
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 984
length of database: 10,358,551
effective HSP length: 16
effective length of query: 968
effective length of database: 10,329,639
effective search space: 9999090552
effective search space used: 9999090552
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)